Publications

2018
Historic overview of Phacidiales and insights into the Austral diversity of Tympanidaceae
Johnston, P., et al., 2018. Historic overview of Phacidiales and insights into the Austral diversity of Tympanidaceae.Abstract
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Presented at the International Mycological Congress, July 2018

 

Diversity and Host Specificity in the Genus Sarea Fr. (Ascomycota)
Mitchell, J.K., et al., 2018. Diversity and Host Specificity in the Genus Sarea Fr. (Ascomycota). Presented at the 2018 International Mycological Congress.Abstract

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First published by Fries in 1825, the genus Sarea today comprises two accepted species of resinicolous discomycetes. Both species have a very broad range, with S. difformis reported from North America, Europe, and northwestern Africa, and S. resinae reported from North America, Europe, northern and central Africa, and central and eastern Asia. Both species have also been reported in southern hemisphere locations, such as New Zealand, on non-native trees. Both species also have a broad range of hosts in the Pinaceae, with S. difformis reported on Cedrus atlantica and both Sarea species reported on species of Pinus, Picea, Larix, Pseudotsuga, Abies and Tsuga. In addition, S. resinae has been reported on species in the Cupressaceae, including members of the genera Cupressus, Chamaecyparis, Juniperus and Taxodium. With few exceptions, specimens of each Sarea species share a very similar macro- and micromorphology, with specimens from multiple hosts fitting the specific concepts published by Hawksworth and Sherwood in 1981. Some molecular work has been done on the genus, but in almost all cases sequences are not associated with a vouchered herbarium specimen including the sexual morph. The objective of this study is to determine the degree of relatedness of geographically distant specimens collected in North America, Europe, and Macaronesia on different native and non-native host species. With permission, collections have been made of both species of Sarea from California, Georgia and the New England states in the USA, Northern and Southern Europe and Macaronesia. In addition to detailed measurements of the micromorphological features of specimens, ITS and LSU sequences have been generated using Sanger sequencing for analysis and comparison with published sequences. In contrast to the generally only slight morphological differences noted among specimens, ITS sequences from Europe, Asia, and North America not only differ by about 4% from each other, but also when submitted to phylogenetic analyses form multiple well-supported clades for each continent. These patterns are supported by similar analyses using the LSU sequences and ITS+LSU sequences. These clades also point to host specificity at the host family or genus level. In conclusion, the composition of the genus Sarea seems much more complicated than previously reported, with the possibility of multiple cryptic species in both accepted taxa; additional work must be done to further expand geographical and host range sampling of specimens to include in these analyses in order to approach a full picture of the diversity in Sarea.

Kiran, M., et al., 2018. Amanita griseofusca: A new species of Amanita in section Vaginatae from MalamJabba, Swat, Pakistan. Phytotaxa , 364 (2) , pp. 181-192.Abstract

 A new species, Amanita griseofusca  in section Vaginatae  is described and illustrated here from Pakistan. Distinguishing

characters of the new species include medium-sized basidiomata, greyish brown pileus surface with white to beige, membranous

volval remnants present as one (large) to a few (small) warts, close lamellae which are cream colored with a pink

tone, striations one third of the total pileus radius, broadly ellipsoidal to ellipsoidal basidiospores and white loose saccate

volva turning beige at maturity. Molecular data inferred from partial nuc rDNA internal transcribed spacer region (ITS),

partial nuc rDNA larger subunit region (LSU) and partial translation elongation factor 1-alpha (tef1) confirms the novelty

of the present taxon.

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Quijada, L., et al., 2018. Overview of Phacidiales, including Aotearoamyces gen. nov. on Nothofagus. IMA Fungus , 9 (2) , pp. 371–382.Abstract
The new genus Aotearoamyces is proposed to accommodate a single species that was repeatedly collected on fallen wood in Nothofagaceae forests of New Zealand and was previously misidentified as a Claussenomyces species. This monotypic genus belongs to Tympanidaceae, a recently erected family in PhacidialesAotearoamyces is differentiated from other Tympanidaceae by phragmospores that do not form conidia either in or outside the asci, an exciple of textura intricata with hyphae widely spaced and strongly gelatinized (plectenchyma), and apically flexuous, partly helicoid paraphyses. The asexual morph was studied in pure culture. Phylogenetic analyses of combined SSU, ITS and LSU sequences strongly support a sister relationship between the sexually typified Aotearoamyces and the asexually typified “Collophorina” paarla characterized morphologically by forming endoconidia, a feature not found in the genetically distinct type species of Collophorina. Based on our molecular results, we place the genus Epithamnolia in the Mniaecia lineage within Phacidiales.
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Molina, P., 2018. Chapter 8: Donald Pfister - Tiny Species in a Big Lost World. In 15 Years of Harvard in Chile: Lights on the South. David Rockefeller Center for Latin American Studies, pp. 92-101. PDF
Iturriaga, T., Stadler, M. & Pfister, D.H., 2018. Editorial to the Special Issue dedicated to Prof. Richard P. Korf. Mycological Progress , 17 , pp. 1-3. PDF
Hussain, S., et al., 2018. The genus Parasola in Pakistan with the description of two new species. MycoKeys , 30 , pp. 41-60.Abstract

Parasola is a genus of small, veil-less coprinoid mushrooms in the family Psathyrellaceae (Agaricales). The genus is not well documented in Asia, specifically in Pakistan. In this study we describe two new species Parasola glabra and P. pseudolactea from Pakistan, based on morphological and molecular data. Phylogeny based on three DNA regions: nuc rDNA region encompassing the internal transcribed spacers 1 and 2 along with the 5.8S rDNA (ITS), nuc 28S rDNA D1-D2 domains (28S) and translation elongation factor 1α gene (TEF1α) show that the new taxa are clustered in a clade formed by the members of section Parasola of genus ParasolaParasola glabra with grayish pileus, slightly depressed pileal disc, lamellae separated from the stipe by pseudocollarium, basidiospores 14.5–16.5 × 9.5–11.5 × 8.0–10.5 µm, in front view broadly ovoid to oblong, some with rhomboidal outline, in side view ellipsoid, with eccentric germ-pore of 1.5 µm diameter. Parasola pseudolactea with yellowish brown to dull brown pileus, disc indistinctly umbonate, lamellae free, pseudocollarium absent, basidiospores 13.5–14.5 × 10.5–12.0 × 9.5–10.5 µm, in face view rounded triangular to heart shaped, rarely ovoid to subglobose, in side view ellipsoid to oblong, with eccentric germ-pore of 1.5 µm diam. In addition to these new species, P. auricoma and P.lilatincta were also studied. Morphological descriptions for the new species and comparison with known Parasola species are provided. Our observations highlight the diversity of Parasola in northern Pakistan and further document the need for additional systematic focus on the region’s fungi.

Keywords:

Basidiomycota, diversity, Parasola, phylogeny, taxonomy

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Lu, F., et al., 2018. Otidea species from China, three new species with comments on some previously described species. Mycological Progress , 17 (1-2) , pp. 77–88.Abstract

The genus Otidea was recently monographed and studied phylogenetically, but knowledge of the diversity and distribution of Otidea species in China is fragmentary. In this study, collections from China were examined morphologically and included in phylogenetic analyses. Using LSU, TEF1-α, and RPB2 new species were placed within previously recognized clades in the genus. The results agree with both Genealogical Concordance Phylogenetic Species Recognition (GCPSR) and genetic divergence as previously reported. Three new species, Otidea hanseniaeOtidea korfii and Otidea purpureogrisea are recognized based on phylogenetic reconstruction using ITS, LSU, TEF1- α and RPB2. Comments on some incompletely known species are added. With the discovery of these three new species, the genus Otidea in China proves to be more diverse than previously recognized.

Keywords

Morphology Otidea hanseniae sp. nov. Otidea purpureogrisea sp. nov. Otidea korfii sp. nov. Pyronemataceae 

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Hussain, S., et al., 2018. Underexplored regions of Pakistan yield five new species of Leucoagaricus. Mycologia , pp. 1-36.Abstract

The large genus Leucoagaricus (Basidiomycota) is poorly studied in Pakistan, where the northern parts of the country are considered hotspots for biodiversity. Based on morphological and molecular data, five new species are described: Leucoagaricus badius, L. lahorensiformis, L. pakistaniensis, L. sultanii and L. umbonatus. Descriptions and illustrations are given for the new taxa. A phylogeny based on morphology and four DNA regions, including the internal transcribed spacers (ITS1-5.8S-ITS2 = ITS) and D1-D2 domains of the 28S gene of the nuc rDNA), the gene for RNA polymerase II second largest subunit (RPB2) and the translation elongation factor 1α gene (TEF1-α), show that the new taxa are clustered in a clade representing Leucoagaricus section Rubrotincti subgenus Sericeomyces.

KEY WORDS: AgaricalesbiodiversityLeucocoprinusMalakandphylogenetic analysistaxonomy

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2017
2017. The Asian bambusicolous genus Myriodiscus connects with the genus Tympanis, the North American-European tree pathogen.Abstract
Presented at the 2nd Mediterranean Mycological Congress Platres / Cyprus 1-3 December 2017
A survey of fungi in Gorongosa National Park, Mozambique
J.M., K., et al., 2017. A survey of fungi in Gorongosa National Park, Mozambique.Abstract

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Gorongosa National Park (GNP) was a frequent battleground during the Mozambican Civil War (1977-1992) and was left unprotected for a decade after cessation of hostilities. In that time, the Park’s fauna was decimated. Today, restoration of the wildlife and tourist infrastructure is advancing apace with support from the Gregory C. Carr Foundation. The establishment of the E. O. Wilson Biodiversity Laboratory in the Park, modeled along the lines of the Smithsonian Tropical Research Institute on Barro
Colorado Island in Panama, provided an attractive research destination.

We conducted a fungal survey of GNP in June-July of 2016. Our survey was conducted in the beginning of the dry season and our collections represent species in fruit during a season that is not often sampled. We collected voucher specimens at random localities and habitats within the Park, focusing on discomycetes, polypores and anamorphic fungi. Despite a severe drought that had affected the region that year, we made
over 500 collections.

Pfister, D.H. & LoBuglio, K.F., 2017. Lost and found: the Bermudan Donadinia seaveri found in North America, with comments on its juniper associates. Mycologia , 110 (1) , pp. 215-221.Abstract

Collections of a species referred to Sarcosomataceae (Pezizomycetes) from eastern North America were studied both morphologically and using nuc rDNA internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2 = ITS) and approximately 800 bp from the 5' region of the nuc 28S rDNA (28S) to construct a phylogeny. The analyses indicate that these collections are Donadinia seaveri, a species previously known only from Bermuda. Because the associated tree, Juniperus bermudiana, has declined as a result of insect attack, it was thought that D. seaveri might be extinct. This work indicates that it is not extinct but is present in eastern North America. The species is described, new distributional records are given, and its association with the genus Juniperus is discussed.

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Iturriaga, T., LoBuglio, K.F. & Pfister, D.H., 2017. Bulgariella pulla, a Leotiomycete of uncertain placement, with an uncommon type of ascus opening. Mycologia , 109 (6) , pp. 900-911.Abstract
Bulgariella pulla (Leotiomycetes) is redescribed with the addition of characters of the ascus, spores, and habitat that were previously unconsidered. The ascus dehiscence mechanism in Bulgariella is unusual among Leotiomycetes. In this genus, asci lack a pore and open by splitting to form valves. Phylogenetic analyses of partial sequences of translation elongation factor 1-α (TEF1-α), the second largest subunit of RNA polymerase II (RPB2), and the 18S and 28S nuc rRNA genes determined that Bulgariella belongs within Leotiomycetes but without conclusive assignment to an order or family. A comparison of the nuc rDNA internal transcribed spacers 1 and 2 plus the 5.8S gene (ITS) determined that Bulgariella isolates from the USA, Norway, and Sweden had 100% sequence similarity, and an isolate from Chile had 99.3% similarity with these isolates. These results support the proposition that these collections represent a single species, B. pulla. Bulgariella sphaerospora, a more recently described species, is confirmed as conspecific with B. pulla.
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Haelewaters, D., et al., 2017. Parasites of parasites of bats: Laboulbeniales (Fungi: Ascomycota) on bat flies (Dipera: Nycteribiidae) in central Europe. Parasites & Vectors , 10 (96) , pp. 1-14.Abstract
Bat flies (Streblidae and Nycteribiidae) are among the most specialized families of the order Diptera. Members of these two related families have an obligate ectoparasitic lifestyle on bats, and they are known disease vectors for their hosts. However, bat flies have their own ectoparasites: fungi of the order Laboulbeniales. In Europe, members of the Nycteribiidae are parasitized by four species belonging to the genus Arthrorhynchus. We carried out a systematic survey of the distribution and fungus-bat fly associations of the genus in central Europe (Hungary, Romania).
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Pfister, D.H., et al., 2017. Richard Paul Korf (1925 - 2016). Mycologia , 109 (3) , pp. 529-534.Abstract
"With poetry, the tune is in the words themselves-and once you begin to hear it, it will stay with you." Richard P. Korf, notes to his narration of John Brown's Body.
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Healy, R., et al., 2017. Pseudotricharina lanigera (Pezizales), a new species from the Patagonian region of Argentina. Ascomycete , 9 (4) , pp. 135-138.Abstract
A species of Pseudotricharina, similar in sequence and morphology to the type species P. intermedia, is described from a soil bank in a Nothofagus forest of the Andes Mountains of Argentina. This is only the second species of Pseudotricharina to be described and the first known from the Southern Hemisphere.
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Zhao, C.-L., et al., 2017. Heterobasidion amyloideopsis sp. nov. (Basidiomycota, Russulates) evidenced by morphological characteristics and phylogenic analysis. Phytotaxa , 317 (3) , pp. 199-210.Abstract
Heterobasidion amyloideopsis sp. nov., a new poroid wood-inhabiting species from Pakistan, is introduced based on a combination of molecular evidence and morphological characteristics. We generated sequences from the nuclear internal transcribed spacer regions (ITS) and the large subunit ribosomal RNA gene (LSU), the gene encoding the largest subunit of RNA polymerase II (RPB1) and the second subunit of RNA polymerase II (RPB2), focusing on two specimens from Pakistan. We performed phylogenetic analyses with maximum likelihood, maximum parsimony, and bayesian inference methods on two datasets (RPB1+RPB2 and ITS+nLSU+RPB1+RPB2). Both analyses supported the existence of the new species and showed that it formed a monophyletic group within the H. insulare complex as a sister to H. amyloideum. In addition to assessing the origin and divergence of this new species, we focused on the RPB1+RPB2 dataset to perform maximum likelihood based estimation and Bayesian binary analyses. Heterobasidion amyloideopsis is characterized by an annual habit, pileate basidiomata with a rust colored pileal surface, white, obtuse margin, a dimitic hyphal system with simple septate generative hyphae in the trama and clamp connections present on the contextual hyphae, amyloid skeletal hyphae and broadly ellipsoid, hyaline, fairly thick-walled, and asperulate basidiospores.
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Truong, C., et al., 2017. How to know the fungi: combining field inventories and DNA-barcoding to document fungal diversity. New Phytologist , 214 , pp. 913-919. PDF
Kumar, L.M., et al., 2017. A molecular and morphological re-examination of the generic limits of truffles in the tarzetta-geopyxis lineage - Densocarapa, Hydnocystis and Paurocotylis. Fungal Biology , pp. 1-21.Abstract

Truffle species within the /tarzetta-geopyxis lineage share smooth, globose, hyaline spores, but differ in the amount of convolution of hymenia in ascomata. The relation- ships among truffle species in this lineage have historically been confused. Phylogenetic analyses of the ITS and 28S nuclear ribosomal DNA from recently collected members of the /tarzetta-geopyxis lineage from Asia, Austral Asia, North America, and South America prompted a reinvestigation of species and generic limits in the truffle genera Hydnocystis, Paurocotylis, and Stephensia. Our analyses support emendations of Hydnocystis and Pauro- cotylis, abandonment of Stephensia and the resurrection of the genus Densocarpa. Nomen- clatural changes include the transfer of Stephensia bombycina to Hydnocystis, the transfer of Hydnocystis singeri and Stephensia bynumii to Paurocotylis, the reinstatement of Denso- carpa for Stephensia shanori and transfer of Stephensia crocea to Densocarpa. This is the first detection of the genus Paurocotylis in the Americas. We describe three new species, Hyd- nocystis transitoria from North America, Paurocotylis patagonica from South America, andPaurocotylis watlingii from Australia. Our work highlights the unexplored diversity, mor- phological plasticity, and remaining taxonomic problems among truffles in the /tarzetta- geopyxis lineage.

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2016
Wang, T.W., Haelewaters, D. & Pfister, D.H., 2016. Long-hidden in Thaxter’s treasure trove: Laboulbenia camerunensis sp. nov. parasitic on African Curculionidae. Mycotaxon , 131 , pp. 613-619.Abstract

A new species, Laboulbenia camerunensis, parasitic on Curculio sp. from Cameroon, is described from a historical slide prepared by Roland Thaxter. It is the seventh species to be described from the family Curculionidae worldwide and the first from the

African continent. The species is recognized by the characteristic outer appendage. The latter consists of two superimposed hyaline cells, separated by a black constricted septum, the suprabasal cell giving rise to two branches, the inner of which is simple and hyaline, and the outer tinged with brown. A second blackish constricted septum is found at the base of this outermost branch. Description, illustrations, and comparison to other species are given.

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